diff options
Diffstat (limited to 'biology/emboss/pkg-plist')
| -rw-r--r-- | biology/emboss/pkg-plist | 109 |
1 files changed, 109 insertions, 0 deletions
diff --git a/biology/emboss/pkg-plist b/biology/emboss/pkg-plist index 4eb442cef213..0c277d0ee003 100644 --- a/biology/emboss/pkg-plist +++ b/biology/emboss/pkg-plist @@ -8,6 +8,7 @@ bin/checktrans bin/chips bin/cirdna bin/codcmp +bin/coderet bin/complex bin/compseq bin/cons @@ -151,10 +152,12 @@ share/EMBOSS/acd/chips.acd share/EMBOSS/acd/cirdna.acd share/EMBOSS/acd/cluster.acd share/EMBOSS/acd/codcmp.acd +share/EMBOSS/acd/coderet.acd share/EMBOSS/acd/codes.english share/EMBOSS/acd/complex.acd share/EMBOSS/acd/compseq.acd share/EMBOSS/acd/cons.acd +share/EMBOSS/acd/corbatest.acd share/EMBOSS/acd/cpgplot.acd share/EMBOSS/acd/cpgreport.acd share/EMBOSS/acd/cusp.acd @@ -248,6 +251,7 @@ share/EMBOSS/acd/redata.acd share/EMBOSS/acd/remap.acd share/EMBOSS/acd/restrict.acd share/EMBOSS/acd/revseq.acd +share/EMBOSS/acd/scope.acd share/EMBOSS/acd/seealso.acd share/EMBOSS/acd/seqinfo.acd share/EMBOSS/acd/seqmatchall.acd @@ -532,16 +536,20 @@ share/EMBOSS/data/Eantigenic.dat share/EMBOSS/data/Ebases.iub share/EMBOSS/data/Edayhoff.freq share/EMBOSS/data/Edna.melt +share/EMBOSS/data/Eembl.ior share/EMBOSS/data/Eenergy.dat share/EMBOSS/data/Efeatures.embl share/EMBOSS/data/Efeatures.gff share/EMBOSS/data/Efreqs.dat share/EMBOSS/data/Ehth.dat share/EMBOSS/data/Ehth87.dat +share/EMBOSS/data/Ememe.dat share/EMBOSS/data/Enakai.dat share/EMBOSS/data/Epepcoil.dat share/EMBOSS/data/Epk.dat share/EMBOSS/data/Epprofile +share/EMBOSS/data/Eprior1.plib +share/EMBOSS/data/Eprior30.plib share/EMBOSS/data/Erna.melt share/EMBOSS/data/Esig.euk share/EMBOSS/data/Esig.pro @@ -666,12 +674,17 @@ share/doc/EMBOSS/programs/html/chaos0.gif share/doc/EMBOSS/programs/html/checktrans.html share/doc/EMBOSS/programs/html/chips.html share/doc/EMBOSS/programs/html/cirdna.html +share/doc/EMBOSS/programs/html/clique.html share/doc/EMBOSS/programs/html/codcmp.html +share/doc/EMBOSS/programs/html/coderet.html share/doc/EMBOSS/programs/html/coding_regions_group.html share/doc/EMBOSS/programs/html/comparison_group.html share/doc/EMBOSS/programs/html/complex.html share/doc/EMBOSS/programs/html/compseq.html share/doc/EMBOSS/programs/html/cons.html +share/doc/EMBOSS/programs/html/consense.html +share/doc/EMBOSS/programs/html/contml.html +share/doc/EMBOSS/programs/html/contrast.html share/doc/EMBOSS/programs/html/cpg_islands_group.html share/doc/EMBOSS/programs/html/cpgplot.html share/doc/EMBOSS/programs/html/cpgplot0.gif @@ -693,31 +706,67 @@ share/doc/EMBOSS/programs/html/display_alignment_multiple_group.html share/doc/EMBOSS/programs/html/dna_sequence_composition_group.html share/doc/EMBOSS/programs/html/dna_sequence_features_group.html share/doc/EMBOSS/programs/html/dna_sequence_properties_group.html +share/doc/EMBOSS/programs/html/dnacomp.html +share/doc/EMBOSS/programs/html/dnadist.html +share/doc/EMBOSS/programs/html/dnainvar.html +share/doc/EMBOSS/programs/html/dnaml.html +share/doc/EMBOSS/programs/html/dnamlk.html +share/doc/EMBOSS/programs/html/dnapars.html +share/doc/EMBOSS/programs/html/dnapenny.html +share/doc/EMBOSS/programs/html/dollop.html +share/doc/EMBOSS/programs/html/dolpenny.html share/doc/EMBOSS/programs/html/dotmatcher.html share/doc/EMBOSS/programs/html/dotmatcher0.gif share/doc/EMBOSS/programs/html/dotpath.html share/doc/EMBOSS/programs/html/dottup.html share/doc/EMBOSS/programs/html/dottup0.gif share/doc/EMBOSS/programs/html/dreg.html +share/doc/EMBOSS/programs/html/eclique.html +share/doc/EMBOSS/programs/html/econsense.html +share/doc/EMBOSS/programs/html/econtml.html +share/doc/EMBOSS/programs/html/econtrast.html +share/doc/EMBOSS/programs/html/ednacomp.html +share/doc/EMBOSS/programs/html/ednadist.html +share/doc/EMBOSS/programs/html/ednainvar.html +share/doc/EMBOSS/programs/html/ednaml.html +share/doc/EMBOSS/programs/html/ednamlk.html +share/doc/EMBOSS/programs/html/ednapars.html +share/doc/EMBOSS/programs/html/ednapenny.html +share/doc/EMBOSS/programs/html/edollop.html 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share/doc/EMBOSS/programs/html/etandem.html share/doc/EMBOSS/programs/html/extractseq.html +share/doc/EMBOSS/programs/html/factor.html share/doc/EMBOSS/programs/html/findkm.html share/doc/EMBOSS/programs/html/findkm0.gif +share/doc/EMBOSS/programs/html/fitch.html share/doc/EMBOSS/programs/html/freak.html share/doc/EMBOSS/programs/html/fuzznuc.html share/doc/EMBOSS/programs/html/fuzzpro.html share/doc/EMBOSS/programs/html/fuzztran.html share/doc/EMBOSS/programs/html/garnier.html share/doc/EMBOSS/programs/html/geecee.html +share/doc/EMBOSS/programs/html/gendist.html share/doc/EMBOSS/programs/html/gene_finding_group.html share/doc/EMBOSS/programs/html/getorf.html share/doc/EMBOSS/programs/html/groups.html @@ -728,16 +777,20 @@ share/doc/EMBOSS/programs/html/index.html share/doc/EMBOSS/programs/html/infoseq.html share/doc/EMBOSS/programs/html/isochore.html share/doc/EMBOSS/programs/html/isochore0.gif +share/doc/EMBOSS/programs/html/kitsch.html share/doc/EMBOSS/programs/html/lindna.html share/doc/EMBOSS/programs/html/maskfeat.html share/doc/EMBOSS/programs/html/maskseq.html share/doc/EMBOSS/programs/html/matcher.html share/doc/EMBOSS/programs/html/megamerger.html share/doc/EMBOSS/programs/html/merger.html +share/doc/EMBOSS/programs/html/mix.html share/doc/EMBOSS/programs/html/motifs_group.html share/doc/EMBOSS/programs/html/msbar.html +share/doc/EMBOSS/programs/html/mse.html share/doc/EMBOSS/programs/html/mutation_group.html share/doc/EMBOSS/programs/html/needle.html +share/doc/EMBOSS/programs/html/neighbor.html share/doc/EMBOSS/programs/html/new_group_group.html share/doc/EMBOSS/programs/html/newcpgreport.html share/doc/EMBOSS/programs/html/newcpgseek.html @@ -752,6 +805,7 @@ share/doc/EMBOSS/programs/html/pasteseq.html share/doc/EMBOSS/programs/html/patmatdb.html share/doc/EMBOSS/programs/html/patmatmotifs.html share/doc/EMBOSS/programs/html/pattern_matching_group.html +share/doc/EMBOSS/programs/html/penny.html share/doc/EMBOSS/programs/html/pepcoil.html share/doc/EMBOSS/programs/html/pepinfo.html share/doc/EMBOSS/programs/html/pepinfo1.gif @@ -784,6 +838,7 @@ share/doc/EMBOSS/programs/html/profit.html share/doc/EMBOSS/programs/html/prophecy.html share/doc/EMBOSS/programs/html/prophet.html share/doc/EMBOSS/programs/html/prosextract.html +share/doc/EMBOSS/programs/html/protdist.html share/doc/EMBOSS/programs/html/protein_sequence_composition_group.html share/doc/EMBOSS/programs/html/protein_sequence_features_group.html share/doc/EMBOSS/programs/html/protein_sequence_properties_group.html @@ -793,11 +848,13 @@ share/doc/EMBOSS/programs/html/redata.html share/doc/EMBOSS/programs/html/reformatting_group.html share/doc/EMBOSS/programs/html/remap.html share/doc/EMBOSS/programs/html/repeats_group.html +share/doc/EMBOSS/programs/html/restml.html share/doc/EMBOSS/programs/html/restrict.html share/doc/EMBOSS/programs/html/restriction_enzymes_group.html share/doc/EMBOSS/programs/html/revseq.html 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share/doc/EMBOSS/programs/text/newseq.txt @@ -913,6 +1017,7 @@ share/doc/EMBOSS/programs/text/palindrome.txt share/doc/EMBOSS/programs/text/pasteseq.txt share/doc/EMBOSS/programs/text/patmatdb.txt share/doc/EMBOSS/programs/text/patmatmotifs.txt +share/doc/EMBOSS/programs/text/penny.txt share/doc/EMBOSS/programs/text/pepcoil.txt share/doc/EMBOSS/programs/text/pepinfo.txt share/doc/EMBOSS/programs/text/pepnet.txt @@ -933,13 +1038,16 @@ share/doc/EMBOSS/programs/text/profit.txt share/doc/EMBOSS/programs/text/prophecy.txt share/doc/EMBOSS/programs/text/prophet.txt share/doc/EMBOSS/programs/text/prosextract.txt +share/doc/EMBOSS/programs/text/protdist.txt share/doc/EMBOSS/programs/text/pscan.txt share/doc/EMBOSS/programs/text/rebaseextract.txt share/doc/EMBOSS/programs/text/redata.txt share/doc/EMBOSS/programs/text/remap.txt +share/doc/EMBOSS/programs/text/restml.txt share/doc/EMBOSS/programs/text/restrict.txt share/doc/EMBOSS/programs/text/revseq.txt share/doc/EMBOSS/programs/text/seealso.txt +share/doc/EMBOSS/programs/text/seqboot.txt share/doc/EMBOSS/programs/text/seqmatchall.txt share/doc/EMBOSS/programs/text/seqret.txt share/doc/EMBOSS/programs/text/seqretall.txt @@ -962,6 +1070,7 @@ share/doc/EMBOSS/programs/text/tfextract.txt share/doc/EMBOSS/programs/text/tfm.txt share/doc/EMBOSS/programs/text/tfscan.txt share/doc/EMBOSS/programs/text/tmap.txt +share/doc/EMBOSS/programs/text/topo.txt share/doc/EMBOSS/programs/text/transeq.txt share/doc/EMBOSS/programs/text/trimseq.txt share/doc/EMBOSS/programs/text/vectorstrip.txt |